Ground - Black
12V - Red
Tach/Sense (RPM readout signal for monitoring) - Yellow
The fan is using a standard PC CPU fan header. The card? Well I have no clue what it is laid out for. I would probe the pins for voltage. Looking at photos of other OrangePCi cards, they leave the sense pin hanging, and just have the 12V and Ground plugged in. So reverse the orientation so the black wire is plugged into the middle pin and the red wire is on the 12v pin. Yellow wire hangs out doing nothing.
Looks like OrangeMicro did this for flexibility in fan suppliers. Some of their boards have 5v fans on them.
EDIT:
https://68kmla.org/bb/index.php?threads/orangepc-660-installation-attempt.6410/
Someone here has a 660 and it looks like that fan has a plug with no sense wire.